Comprehensive Guide

South Sudan ECTN Certificate — The Complete Guide

Last updated: August 4, 2026

The ECTN (Electronic Cargo Tracking Note) is required for sea shipments to South Sudan, discharging at Juba (Dry Port via Mombasa). This guide covers the documents you need, how the filing runs, and the country-specific rules that decide whether the certificate validates on the first attempt.

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Overview

The ECTN — Electronic Cargo Tracking Note — is the electronic cargo tracking note required for sea shipments to South Sudan, which discharge at Juba (Dry Port via Mombasa). It ties the shipper, consignee, cargo and freight values on your Bill of Lading to a single reference that customs can reconcile before the cargo is worked. Filing deadline: Validated before the vessel reaches the port of discharge. Cargo that only passes through on its way to a landlocked neighbour is treated as in-transit and still needs a certificate, so the routing has to be documented from the start.

Discharge ports

Juba (Dry Port via Mombasa)

Required documents

Bill of Lading
Draft or final; weights, seals and discharge port must match the cargo.
Commercial Invoice
Goods and declared values as shipped.
Freight Invoice
Required when freight is not shown on the commercial invoice.
Export Customs Declaration

Official ECTN Document Sample

Verify the layout, stamps, and ECTN customs format of a validated South Sudan loading certificate:

Official South Sudan ECTN sample document
Sample Draft

Application process

  1. 1
    Submit
    Send your Bill of Lading and Commercial Invoice, with the Freight Invoice if freight is not shown on the commercial invoice.
  2. 2
    Draft & invoice
    We prepare a draft certificate and a fixed-price invoice within 1 hour on average.
  3. 3
    Approve
    You review the draft and confirm every detail before anything is filed.
  4. 4
    Payment
    The fixed-price invoice is settled so the file can go forward for validation.
  5. 5
    Validate
    The certificate is validated and the final ECTN number is confirmed.

Timeline

StepDuration
Submit documentsYour action
Draft & invoice1 hour on average
Approve draftYour action
PaymentYour action

Special rules & HS codes

Rule 1

The ECTN number is issued at validation, so it cannot be supplied in advance.

Rule 2

Final, dated MBL is required prior to validation.

Rule 3

Shipper, consignee and notify parties address must match between all documents.

Rule 4

Weight on export declaration must match the BL.

Rule 5

Statistical value on export declaration must match the commercial invoice.

Rule 6

Shipper owned containers must have the tare weight mentioned on the BL.

Rule 7

A pre-validated certificate has to be completed within its validity window or it is cancelled.

Rule 8

Country of Origin of the goods.

Official sources

Official South Sudan ECTN sources

The South Sudan ECTN is run by the South Sudan Revenue Authority on its own portal.

accessed

Top 3 causes of South Sudan ECTN problems

  • The port of discharge (Mombasa, Dar es Salaam or Port Sudan) or the final destination in South Sudan is not stated.
  • Commercial invoice is not stamped by the South Sudan Embassy or Chamber of Commerce where this is required.
  • Parties, addresses, weights or values differ between the Bill of Lading, the invoice and the export declaration.

Specific questions: South Sudan

Who issues the South Sudan ECTN?

The South Sudan Revenue Authority (SSRA), on its ECTN portal ectnssra.com. Individuals and companies register on the portal, upload the documents, pay by prepayment or cash on delivery, and follow the application status online.

Do exports from South Sudan need an ECTN?

Yes. The SSRA describes the ECTN as mandatory for all cargo entering or exiting South Sudan, so outbound cargo needs one as well as imports.

My cargo for Juba is discharged at Port Sudan. Which certificates do I need?

Both the South Sudan ECTN and the Sudan ACD. The South Sudan ECTN follows the final destination, and Sudan’s ACD is required for cargo passing through Port Sudan in transit as well.

What is the penalty for shipping to South Sudan without an ECTN?

According to ANTASER’s notices, a 2022 customs circular set a penalty of USD 5,000 per infringement, on top of the delay and storage while the certificate is regularised.

Latest updates: South Sudan

  • South Sudan's Ministry of Trade and Commerce mandates Cargo Tracking Note (CTN) certificates for all imports and exports, effective April 1, 2019.

Frequently asked questions

The ECTN — Electronic Cargo Tracking Note — is the electronic cargo tracking note required for sea shipments to South Sudan, discharging at Juba (Dry Port via Mombasa).

Bill of Lading, Commercial Invoice, Freight Invoice and Export Customs Declaration.

Validated before the vessel reaches the port of discharge.

A draft certificate and a fixed-price invoice come back within 1 hour on average of receiving your documents.

Yes. Cargo moving onward to a landlocked neighbour still needs a certificate, and the transit routing must be documented.

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